Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889038.1_cds_XP_016443698.1_38833
CDS Infomation

[gene=LOC107769037] [db_xref=GeneID:107769037] [protein=transcription factor HBP-1b(c38)-like] [protein_id=XP_016443698.1] [location=join(85131..85396,85485..85585,86067..86143,86638..86757,86908..86976,87144..87203,87318..87395,87496..87571,88107..88378,89755..89994,90663..90812)] [gbkey=CDS]
Sequence

ATGGGATTTGAAGGATCTTATTCAACAGAGCAAGAAAATAAGCTTTCTTTTGGTGTTGGA
GTTCATTTCATGGCTTCCTCTAACAAAAGCAATGACGACCTTTTACTAAATAATAATAGT
CAAATTTCTTTTGGAAGCCAACAACAGTTTTTTCATAGTCCTCAGCAGCAACATGATCAG
CACCAACTTCAAAATAATAGTAATCAGATTTCTTTTGGTCTGTTACAACAGCAGTCATCT
TCTTCATCAAATCCTGGAAATTTCATAAACAAAGATAATAGTGGAGCTTATGATTTGGGA
GAACTAGATCAAGCACTTTTTCTTTATCTTGACGGACAAGAGCCTTCTTCAATCCAAGAT
CAAAGACAGAATTCTGGGATGAGGCCACCAACTCTCAACATTTTTCCATCACAGCCAATG
CATATCGAGCCTTCCTCAACTAAGGCAAATAATGGATTAGTTTCACAATCTACAAGTGGT
TCCAAGAAATCATCTCAGCCGTCCATGGCTAAAACTGATATTATTCCTTCTGCTTCTGGA
CCTGAACCACCCAAAACTGCTAAGCGAGAGGGAATTCGGAAAGGTCCAACTTCAAGTTCA
GAGCAAGATGCACCCAAAACACCAGACCCCAAGACATTAAGGCGACTTGCTCAGAATAGA
GAAGCAGCTAGGAAAAGCAGACTTAGGAAAAAGGCTTATGTTCAACAGCTAGAGACAAGT
AGAATAAGACTAGCACAATTAGAGCAAGAAATACAAAGGGCAAGATCTCAAGGATTTTAT
GCTGGTGGAAGTGCTCTTCAAGCAGGAGACCAAGGCCTTGCTGTTAATATGGCCAATATC
AGCTCAGATGCTGCAATTTTCGACTTAGAGTATGCAAGATGGCTGGAGGAACACCATCGT
CTAATGTGCGAGCTTAGGAATGCAGTACAGGAGCATTTGCAAGAGAACGAACTTCGTATC
TACGTCGAAAATTGTATAACACATTATGACGAGATAATGAACCTCAAATGCATGCTTGCA
AAATCTGATGTCTTTCATCTCGTTTCTGGCTTATGGAAAACTCCAGCTGAACGTTGTTTC
TTGTGGATGGGTGATTTCCGGCCATCCGAGCTTCTCAAAATAATACTGAGTCAGATTGAG
CCATTAACAGAAAACCAACTAATGGGAATATGTGGGTTACAACAATCAACACAAGAAGCT
GAGGATGCTCTCTCACAAGGATTGGAATCTCTAAATCAATCAATCTCAGACACAATTGCC
TCTGATGCATTGGCTTGCCCACAGAATATGGCCAATTACATGGGCCAAATGGCTCTTGCC
ATGAACAAACTCTCTACTGTTGAAGGTTTCCTTAGACAGGCCGACAATTTGAGGCACCAA
ATGATTCATAGGCTGCATCAAATCTTGACTACTCGTCAAGCCGCGAGGTGTTTTCTGTCA
ATCGGCGAATATTTTCATCGGCTTCGAGCTCTCAGCTCTCTCTGGCTGGCTCGCCCTCGA
CAGGAATAG

Peptide Sequence

PEP ID

XP_016443698.1
PEP Infomation

PREDICTED: transcription factor HBP-1b(c38)-like [Nicotiana tabacum]
Sequence

MGFEGSYSTEQENKLSFGVGVHFMASSNKSNDDLLLNNNSQISFGSQQQFFHSPQQQHDQ
HQLQNNSNQISFGLLQQQSSSSSNPGNFINKDNSGAYDLGELDQALFLYLDGQEPSSIQD
QRQNSGMRPPTLNIFPSQPMHIEPSSTKANNGLVSQSTSGSKKSSQPSMAKTDIIPSASG
PEPPKTAKREGIRKGPTSSSEQDAPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLETS
RIRLAQLEQEIQRARSQGFYAGGSALQAGDQGLAVNMANISSDAAIFDLEYARWLEEHHR
LMCELRNAVQEHLQENELRIYVENCITHYDEIMNLKCMLAKSDVFHLVSGLWKTPAERCF
LWMGDFRPSELLKIILSQIEPLTENQLMGICGLQQSTQEAEDALSQGLESLNQSISDTIA
SDALACPQNMANYMGQMALAMNKLSTVEGFLRQADNLRHQMIHRLHQILTTRQAARCFLS
IGEYFHRLRALSSLWLARPRQE

Transcript Sequence

Gene sequence data has not been registered.